Welcome to Neurodocker!

Neurodocker is a command-line program that generates custom Dockerfiles and Singularity recipes for neuroimaging and minifies existing containers. Its purpose is to make it easier for scientists (and others) to easily create reproducible computational environments.

This website is in progress. Is there is something you would like to see here, please submit a new GitHub issue.

Contents:

• User Guide
  • Installation
  • Quickstart
  • Command-line Interface
  • Examples
  • Common Uses
  • Minify Containers
  • Templates and Renderers
  • Add software to Neurodocker
  • Known Issues
• API Reference
  • Subpackages

Indices and tables

• Index

• Module Index

• Search Page